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Sourdough Discard Bagels

These sourdough discard bagels are fluffy and flavorful, use up your sourdough discard, and can be made the same day!

If you want to long ferment these bagels instead of using yeast, you can absolutely do that using this recipe for long-fermented sourdough bagels.

Related: Sourdough Pretzel Recipe

Related: Zaatar Sourdough Bagels

sourdough discard bagels lined up in a basket lined with a tea towel with each bagel having different toppings

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What are Sourdough Discard bagels

sourdough discard bagels lined up on top of eachother with one cut in half to show the crumb and a side of cream cheese next to them

Sourdough discard bagels are bagels made using unfed, not active, sourdough starter.

Sourdough starter that is inactive is called sourdough discard. It’s convenient to use sourdough discard in baking since you have to discard your sourdough starter anyways – you may as well use it for delicious bagels!

The way you can make bagels rise if using sourdough discard is by adding a pinch of commercial yeast.

Equipment You’ll Need

Recipe Highlights

sourdough discard bagels lined up in a basket lined with a ticking striped tea towel some bagels have everything bagel seasoning and some cheddar cheese
  • Uses up sourdough discard
  • Same day recipe
  • Tastes like a bagel from a bakery
  • Has a slight tang from the sourdough starter
  • Endless customizable topping options
  • Freezable for later
  • Dough is easy to work with

How to Make Sourdough Discard Bagels

Top these bagels with your favorite toppings, smother them with cream cheese and butter or make a delicious sandwich out of them. The options are truly endless with these sourdough discard bagels.

ingredients to make sourdough discard bagels in white bowls with labels saying what they are

Ingredients

  • Yeast – if you want to make this a same-day recipe, you’ll either use an active sourdough starter or yeast.
  • Warm filtered water – you’ll use this for the bagel dough and to boil the bagels. Filtered water is important when baking any sort of bread so that the contaminants in tap water don’t kill your yeast.
  • Sourdough discard – this is just your unfed sourdough starter. You can use active sourdough starter for this recipe by omitting the yeast and feeding your starter several hours before making the dough.
  • Coconut sugar – You’ll use this for the dough and for the water bath in which you’ll boil the bagels.
  • Sea salt – Using high-quality sea salt is best.
  • Flour – all-purpose flour works great.
  • Baking soda – this will be used in the water bath and helps to give the bagels that classic sheen on the outside.
  • Favorite seasonings – the choice is yours! I list tons of ideas in the “topping ideas” section below.

Step by Step Instructions (with photos)

Whisk warm water and yeast in the bowl of a stand mixer and let sit for 5 minutes.

whisking warm water and yeast in the bowl of a stand mixer

Add the rest of the dough ingredients (minus flour and salt) and whisk until combined.

whisking ingredients for sourdough bagel dough in the bowl of a white stand mixer

Add 2 cups flour and knead with the dough hook attachment for 2 minutes until incorporated.

adding flour to a stand mixer to make sourdough discard bagel dough

Let sit for 15 minutes.

Add the rest of the flour and salt then knead for 5-10 minutes on low speed.

Transfer the dough to a greased bowl and let it rest for about 1-2 hours until doubled.

Prep a baking sheet with parchment paper, then grab your bowl of dough and punch the dough down to remove the air.

punching sourdough discard bagel dough down

Turn dough out onto a floured work surface and divide into about 8-10 pieces.

dividing sourdough discard bagel dough into pieces in order to shape into bagels

Shape pieces into bagels

shaped bagel dough in palm of hand

Place bagels on the parchment-lined baking sheet, evenly spaced, cover with a tea towel and let rise again while you prep the water bath.

kitchen prepped for making sourdough discard bagels with a white dutch oven of boiling water and shaped bagels on a parchment lined baking sheet and toppings on the side

Boil a large pot of water and preheat your oven to 425 degrees F.

Once your water has come to a boil add your baking soda and coconut sugar.

adding coconut sugar to a white dutch oven of boiling water

Place bagels into the boiling water (only about 3 at a time) and boil for 1-2 minutes on each side.

placing a sourdough discard bagel into the pot of boiling water with toppings prepped on the side
bagels being boiled in a pot of boiling water

Remove the bagels from the water and place on a parchment-lined baking sheet and sprinkle toppings overtop.

sprinkling toppings on sourdough discard bagels after theyve been pulled out of the boiling water

Once all bagels have been boiled and topped, bake them for about 15-20 minutes until golden brown.

sourdough discard bagels after being boiled and topped ready for baking

Remove from oven, let cool, and serve.

baked sourdough discard bagels on a baking sheet after being pulled out of the oven

How to Store Sourdough Discard Bagels

Just like any bread, these sourdough discard bagels are best day of, however, they can be stored and refreshed using the methods below.

sourdough discard bagels leaning on eachother with a bowl of cream cheese next to them

Room temperature

Store leftover sourdough bagels in an airtight container, or bread box, for up to 3 days.

How to freeze sourdough discard bagels

To freeze sourdough discard bagels, simply let them cool completely and place them in a plastic bag and freeze for up to 3 months.

Pull them out as needed and let them defrost at room temperature, then place in a 200-degree oven until heated to your liking.

In a Pinch Ideas

top view of sourdough discard bagels lined up in a basket

To make sourdough discard bagels in a pinch, you’ll want to make a batch and freeze them for later so you can easily pull them out of the freezer whenever you want one!

By using 2 full tsp of yeast, you’ll be able to make these bagels same-day. However, if you just use a pinch of yeast, you’ll need to let them rise longer.

Sourdough Discard Bagel Tips

three sourdough discard bagels stacked on top of eachother
  1. Big holes – Make the holes bigger than you think you need to make them when you’re shaping your bagel dough. The hole will shrink as they start to puff up and if it isn’t big enough your hole will completely disappear.
  2. Boil the bagels – The boiling step helps the outside of the bagels to cook quickly enough to help the bagels hold their shape during the baking step. Secondly, it helps the seasoning to stick better. Lastly, it gives the bagel a shiny and crisp coating making them absolutely delicious and gorgeous.
  3. Don’t skip the baking soda and sugar in the boiling water – this is used to increase surface gelatinization by breaking down some starch in the bagel dough, and also gives the bagels a “pretzely” taste. 
  4. Rest before adding salt – Be sure to let the dough rest for 15 minutes before adding the salt. If not, the salt will kill the yeast before it has a chance to activate.

How to Shape Bagels

  1. Take each piece and shape it into a ball by gathering up the sides and pinching them together in the center.
  2. Turn the dough over so that the seam side is down on the work surface and gently form a smooth ball. This helps to develop the gluten structure.
  3. Then, using your thumb to poke a hole in the middle rotate your dough around your thumb as you smooth and shape the ring. The hole will need to be bigger than you think since it will shrink as the dough performs its second rise.

How to Make Sourdough Bagels Healthier

a sourdough discard bagel cut in half so you can see the inside with a bunch of whole bagels surrounding it
  1. Use healthier toppings – no matter the recipe, the toppings will get ya! Be sure to use healthy toppings if you want to make these bagels as healthy as possible.
  2. Long ferment the dough – instead of using yeast, consider using an active sourdough starter and long fermenting the dough before shaping the bagels. This makes them more digestible.
  3. Use natural sweetener – Using coconut sugar or honey in the dough is a much healthier option than refined sugar.
  4. Quality ingredients – using quality ingredients when it comes to sea salt, flour, and even your water is important for healthy cooking.

Baker’s Timeline

close up of sourdough discard bagels topped with cheddar cheese and everything bagel seasoning with a cup of cream cheese next to them

This timeline allows you to break “bagel” by 9am – adjust as needed:

6 am – make the bagel dough

8 am – shape bagels

8:30 am – boil and bake

Sourdough Discard Bagel Serving Suggestions

Here are tons of ideas for how you can enjoy your sourdough discard bagels when they’re baked and ready to eat!

sourdough discard bagels lined up on a towel with a jar of cream cheese and one sliced open
  • Deli Sandwich – you can do many variations of a deli bagel sandwich, but simply slice your bagel in half and put your favorite sandwich toppings on it, close it up and eat it like a sandwich!
  • Breakfast sandwich – Same idea as above, except this time you’re making your bagel into a breakfast sandwich. You can put eggs and bacon, sausage, hashbrowns, or whatever else you like on this bagel breakfast sandwich.
  • Classic – Bagel with cream cheese (or butter AND cream cheese – real winner).
  • Simple – Sourdough discard bagel with just butter. This is especially great if you have a delicious topping on your bagel like cheddar cheese or everything bagel seasoning.
  • Sweet – Topping your bagel with something sweet like butter and cinnamon sugar, cream cheese and jam, or slices of fruit is delicious! Be sure to use plain bagels for this option.
  • Avocado toast – instead of using a slice of bread to make avocado toast, use a bagel!
  • Smoked salmon – Smoked salmon and cream cheese is another great option.
  • Tuna salad – my southern tuna salad recipe would go great on these bagels!

Sourdough Discard Bagels Topping Ideas

The topping options for your bagels are endless, here are my top suggestions.

  • Jalapeno Cheddar
  • Everything bagel seasoning
  • Zaatar seasoning
  • Sesame seeds
  • Cheese (use your favorite shredded cheese)
  • Coarse sea salt
  • Dehydrated onions
  • Poppy seeds

The following ideas would be worked into the dough:

  • Cinnamon and raisins
  • Chocolate chips
  • Roasted garlic cloves
  • Blueberries

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More Sourdough Recipes

Roasted Garlic Sourdough Bread

Sourdough Discard Focaccia Bread

Sourdough Discard Muffins

Sourdough Starter from Scratch

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Pin it For Later – Sourdough Discard Bagels

easy sourdough discard bagel recipe

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Print the Sourdough Discard Bagel Recipe

Sourdough discard bagels in a basket lined with a ticking striped tea towel showing off the bagel toppings of everything bagel seasoning and cheddar cheese
Kyrie | Healthfully Rooted Home

Sourdough Discard Bagels

These sourdough discard bagels are fluffy and flavorful, use up your sourdough discard, and can be made the same day!
Prep Time 15 minutes
Cook Time 30 minutes
Rising time 2 hours
Total Time 2 hours 45 minutes
Servings: 10 sourdough discard bagels
Course: Appetizer, Breakfast, Main Course, Snack
Cuisine: American
Calories: 300

Ingredients
  

Bagel Dough
  • 2 tsp yeast
  • 1 1/2 cups warm water
  • 1/2 cup sourdough discard
  • 2 tbs coconut sugar
  • 2 tsp sea salt
  • 4 cups flour
  • coconut oil for greasing the bowl
Water Bath
  • 10 cups filtered water
  • 1 tbs coconut sugar
  • 1 tbs baking soda
Bagel Toppings
  • Favorite seasoning to taste

Method
 

  1. Whisk warm water and yeast in the bowl of a stand mixer and let sit for 5 minutes.
  2. Add the rest of the dough ingredients (minus flour and salt) and whisk until combined.
  3. Add 2 cups flour and knead with the dough hook attachment for 2 minutes until incorporated.
  4. Let sit for 15 minutes.
  5. Add the rest of the flour and salt then knead for 5-10 minutes on low speed.
  6. Transfer the dough to a greased bowl and let it rest for about 1-2 hours until doubled.
  7. Prep a baking sheet with parchment paper, turn dough out onto a floured work surface and divide into about 8-10 pieces.
  8. Shape bagels: Take each piece and shape it into a ball by gathering up the sides and pinching them together in the center. Turn the dough over so that the seam side is down on the work surface and gently form a smooth ball. This helps to develop the gluten structure.Then, using your thumb to poke a hole in the middle rotate your dough around your thumb as you smooth and shape the ring. The hole will need to be bigger than you think since it will shrink as the dough performs its second rise.
  9. Place bagels on the parchment-lined baking sheet, evenly spaced, cover with a tea towel and let rise again while you prep the water bath.
  10. Boil a large pot of water and preheat your oven to 425 degrees F.
  11. Once your water has come to a boil add your baking soda and coconut sugar.
  12. Place bagels into the boiling water (only about 3 at a time) and boil for 1-2 minutes on each side.
  13. Remove the bagels from the water and place on a parchment-lined baking sheet and sprinkle toppings overtop.
  14. Once all bagels have been boiled and topped, bake them for about 15-20 minutes until golden brown.
  15. Remove from oven, let cool, and serve.

Notes

How to Store Sourdough Discard Bagels

Just like any bread, these sourdough discard bagels are best day of, however, they can be stored and refreshed using the methods below.

Room temperature

Store leftover sourdough bagels in an airtight container, or bread box, for up to 3 days.

How to freeze sourdough discard bagels

To freeze sourdough discard bagels, simply let them cool completely and place them in a plastic bag and freeze for up to 3 months.
Pull them out as needed and let them defrost at room temperature, then place in a 200-degree oven until heated to your liking.

In a Pinch Ideas

To make sourdough discard bagels in a pinch, you’ll want to make a batch and freeze them for later so you can easily pull them out of the freezer whenever you want one!
By using 2 full tsp of yeast, you’ll be able to make these bagels same-day. However, if you just use a pinch of yeast, you’ll need to let them rise longer.

Sourdough Discard Bagel Tips

  1. Big holes – Make the holes bigger than you think you need to make them when you’re shaping your bagel dough. The hole will shrink as they start to puff up and if it isn’t big enough your hole will completely disappear.
  2. Boil the bagels – The boiling step helps the outside of the bagels to cook quickly enough to help the bagels hold their shape during the baking step. Secondly, it helps the seasoning to stick better. Lastly, it gives the bagel a shiny and crisp coating making them absolutely delicious and gorgeous.
  3. Don’t skip the baking soda and sugar in the boiling water – this is used to increase surface gelatinization by breaking down some starch in the bagel dough, and also gives the bagels a “pretzely” taste. 
  4. Rest before adding salt – Be sure to let the dough rest for 15 minutes before adding the salt. If not, the salt will kill the yeast before it has a chance to activate. 

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10 Comments

    1. For the dough itself or for the water bath? For the water bath you can use 1:1 ratio. For the dough, I’d use a half tbs since honey is so much sweeter and since it’s in liquid form. I’d also use a tiny bit less water too so your dough isn’t too wet.

  1. This was the first time that I’ve ever tried to make bagels. Your recipe was very straightforward and fairly easy to follow. The first six of my bagels look really good, but the last four looked rather dense and dough. Do you have any idea why that happened? I’d appreciate your input. Thank you.

    1. Hi Lisa, did they taste dense and doughy? Or just look that way? I’m wondering if maybe you boiled or baked the last batch too long? There are SO many things that could have been the cause, though. It’s odd that the same batch produced different texture bagels, though. Which tells me it was likely the boiling or baking step.

  2. 5 stars
    This is my new go to recipe! Fantastic bagels. I’ve made 3 batches so far and all were perfect. I’m looking forward to more and so is the family! Thank you.

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